Step 4: Earthquake Cycle with Prescribed Slip#
This example combines the interseismic deformation from Step 3 and expands on the earthquake ruptures from Step 2. We expand the earthquake ruptures to span the entire along strike length of the top of the slab and also consider earthquake rupture on the splay fault. We use linear Maxwell viscoelastic bulk rheologies in the mantle and deeper part of the slab. Fig. 108 shows the boundary conditions on the domain.
Features
Tetrahedral cells
pylith.meshio.MeshIOCubit
pylith.problems.TimeDependent
pylith.meshio.OutputSolnBoundary
pylith.meshio.DataWriterHDF5
pylith.bc.DirichletTimeDependent
pylith.bc.ZeroDB
spatialdata.geocoords.CSGeo
pylith.materials.Elasticity
pylith.materials.IsotropicLinearElasticity
pylith.materials.IsotropicLinearMaxwell
spatialdata.spatialdb.CompositeDB
spatialdata.spatialdb.SimpleDB
spatialdata.spatialdb.SimpleGridDB
Quasi-static simulation
pylith.faults.KinSrcConstRate
Simulation parameters#
The parameters specific to this example are in step04_eqcycle.cfg
and include:
pylithapp.metadata
Metadata for this simulation. Even when the author and version are the same for all simulations in a directory, we prefer to keep that metadata in each simulation file as a reminder to keep it up-to-date for each simulation.pylithapp
Parameters defining where to write the output.pylithapp.problem
Parameters for the solution field with displacement and Lagrange multiplier subfields.pylithapp.interfaces
Parameters for the earthquake ruptures and aseismic slip (creep) on the top and bottom of the slab.
We extend the duration of the simulation to 300 years.
We impose two earthquake ruptures on slab interface at t=100 and t=200 years and one earthquake rupture on the splay fault at t=250 years.
Now that we have both earthquake rupture and aseismic creep on the top of the slab, we use SimpleDB
spatial databases to give depth-dependent, complementary slip.
We impose uniform slip on the splay fault using a UniformDB
.
As in Step 3 we also adjust the nodesets used for the boundary conditions to remove overlap with the slab to allow the slab to move independently.
$ pylith step04_eqcycle.cfg mat_viscoelastic.cfg
# The output should look something like the following.
>> /software/py38-venv/pylith-opt/lib/python3.8/site-packages/pylith/meshio/MeshIOObj.py:44:read
-- meshiocubit(info)
-- Reading finite-element mesh
>> /pylith/libsrc/pylith/meshio/MeshIOCubit.cc:157:void pylith::meshio::MeshIOCubit::_readVertices(pylith::meshio::ExodusII&,
pylith::scalar_array*, int*, int*) const
-- meshiocubit(info)
-- Component 'reader': Reading 24824 vertices.
>> /pylith/libsrc/pylith/meshio/MeshIOCubit.cc:217:void pylith::meshio::MeshIOCubit::_readCells(pylith::meshio::ExodusII&, pyl
ith::int_array*, pylith::int_array*, int*, int*) const
-- meshiocubit(info)
-- Component 'reader': Reading 134381 cells in 4 blocks.
# -- many lines omitted --
>> /pylith/libsrc/pylith/utils/PetscOptions.cc:235:static void pylith::utils::_PetscOptions::write(pythia::journal::info_t&, const char*, const pylith::utils::PetscOptions&)
-- petscoptions(info)
-- Setting PETSc options:
fieldsplit_displacement_ksp_type = preonly
fieldsplit_displacement_mg_levels_ksp_type = richardson
fieldsplit_displacement_mg_levels_pc_type = sor
fieldsplit_displacement_pc_type = gamg
fieldsplit_lagrange_multiplier_fault_ksp_type = preonly
fieldsplit_lagrange_multiplier_fault_mg_levels_ksp_type = richardson
fieldsplit_lagrange_multiplier_fault_mg_levels_pc_type = sor
fieldsplit_lagrange_multiplier_fault_pc_type = gamg
ksp_atol = 1.0e-12
ksp_converged_reason = true
ksp_error_if_not_converged = true
ksp_rtol = 1.0e-12
pc_fieldsplit_schur_factorization_type = lower
pc_fieldsplit_schur_precondition = selfp
pc_fieldsplit_schur_scale = 1.0
pc_fieldsplit_type = schur
pc_type = fieldsplit
pc_use_amat = true
snes_atol = 1.0e-9
snes_converged_reason = true
snes_error_if_not_converged = true
snes_monitor = true
snes_rtol = 1.0e-12
ts_error_if_step_fails = true
ts_monitor = true
ts_type = beuler
# -- many lines omitted --
30 TS dt 0.1 time 2.9
0 SNES Function norm 8.197330252849e+00
Linear solve converged due to CONVERGED_ATOL iterations 416
1 SNES Function norm 4.780619312733e-10
Nonlinear solve converged due to CONVERGED_FNORM_ABS iterations 1
31 TS dt 0.1 time 3.
>> /software/baagaard/py38-venv/pylith-opt/lib/python3.8/site-packages/pylith/problems/Problem.py:201:finalize
-- timedependent(info)
-- Finalizing problem.
The beginning of the output is near the same as in Steps 2 and 3. The simulation advances 31 time steps. As in Step 3 each linear solve requires about 400 iterations to converge.
Visualizing the results#
The output
directory contains the simulation output.
Each “observer” writes its own set of files, so the solution over the domain is in one set of files, the boundary condition information is in another set of files, and the material information is in yet another set of files.
The HDF5 (.h5
) files contain the mesh geometry and topology information along with the solution fields.
The Xdmf (.xmf
) files contain metadata that allow visualization tools like ParaView to know where to find the information in the HDF5 files.
To visualize the data using ParaView or Visit, load the Xdmf files.
In Fig. 109 we use ParaView to visualize the x displacement field using the viz/plot_dispwarp.py
Python script.
We start ParaView from the examples/subduction-3d
directory and then run the viz/plot_dispwarp.py
Python script as described in ParaView Python Scripts.